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The system optimised the molecules that were most likely to succeed in terms of potency, metabolicstability, synthetic accessibility, and more. The novel molecules were further ranked based on their ADME and selectivity profiles.
Whether or not ML models ultimately prove to be fit for this purpose it is worth pointing out that many visionaries and thought leaders who tout computation as a panacea to humanity’s ills fail to recognize the complexity of biology (take a look at In The Pipeline posts from 2007 | 2015 | 2024 ).
back in 2015 and you may find this review of that seminal contribution to the drug design literature to be informative. Design decisions in lead optimization are typically supported by assays for a range of properties such as solubility, permeability, metabolicstability and off-target activity as well as pharmacokinetic studies.
This was surprising given that replacement of a phenyl with a pyrimidine and fluorination of aryl or heteroaryl rings are techniques often used to increase metabolicstability. ACS Medicinal Chemistry Letters 2015 6 (8), 925-929, [link] [11] Kinesin Spindle Protein (KSP) Inhibitors. Blackaby, Alastair J. Lyssikatos, Peter W.
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